Biochemistry
9th Edition
ISBN: 9781305961135
Author: Mary K. Campbell, Shawn O. Farrell, Owen M. McDougal
Publisher: Cengage Learning
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Chapter 7, Problem 55RE
Interpretation Introduction
Interpretation:
The formation of abzyme by the researchers and the purpose of making abzymes are to be discussed.
Concept introduction:
Abzymes are the antibody molecules, which have the catalytic activity and are able to catalyze the destruction of thousands of target molecules.
It is mainly used to lower the activation energy of the reaction that permits the transition state to exist and the formation of the products.
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The beta-lactamase hydrolyzes the lactam-ring in penicillin. Describe the mechanism
of hydrolysis, insuring to include the involvement of S, D, & K in the reaction sequence. Please help
To map the active site of beta-lactamase, the enzyme was hydrolyzed with trypsin to yield a hexapeptide (P1) with the following amino acids. Glu, Lys, Leu, Phe, Met, and Ser. Treatment of P1 with phenyl isothiocyanate yielded a PTH derivative of phenylalanine and a peptide (P2). Treatment of P1 with cyanogenbromide gave an acidic tetrapeptide (P3) and a dipeptide (P4).Treatment of P2 with 1-fluoro-2,4-dinitrobenzene, followed by complete hydrolysis, yields N-2,4-dinitrophenyl-Glu. P1, P2, and P3 contain the active site serine.
Why doesn't D in this hexapeptide not participate in the hydrolysis of the beta-lactam ring even though S, K, and D are involved in the catalyst?
To map the active site of -lactamase, the enzyme was hydrolyzed with trypsin to yield a hexapeptide (P1) with the following amino acids. Glu, Lys, Leu, Phe, Met, and Ser. Treatment of P1 with phenyl isothiocyanate yielded a PTH derivative of phenylalanine and a peptide (P2). Treatment of P1 with cyanogenbromide gave an acidic tetrapeptide (P3) and a dipeptide (P4).Treatment of P2 with 1-fluoro-2,4-dinitrobenzene, followed by complete hydrolysis, yields N-2,4-dinitrophenyl-Glu. P1, P2, and P3 contain the active site serine.
Using the experimental results described above derive the primary sequence of the active site hexapeptide. Please help!
Chapter 7 Solutions
Biochemistry
Ch. 7 - RECALL What features distinguish enzymes that...Ch. 7 - RECALL What is the metabolic role of aspartate...Ch. 7 - RECALL What molecule acts as a positive effector...Ch. 7 - RECALL Is the term KM used with allosteric...Ch. 7 - Prob. 5RECh. 7 - Prob. 6RECh. 7 - RECALL What is a homotropic effect? What is a...Ch. 7 - RECALL What is the structure of ATCase?Ch. 7 - RECALL How is the cooperative behavior of...Ch. 7 - RECALL Does the behavior of allosteric enzymes...
Ch. 7 - RECALL Does the behavior of allosteric enzymes...Ch. 7 - RECALL Explain what is meant by K0.5.Ch. 7 - REFLECT AND APPLY Explain the experiment used to...Ch. 7 - RECALL Distinguish between the concerted and...Ch. 7 - RECALL Which allosteric model can explain negative...Ch. 7 - RECALL With the concerted model, what conditions...Ch. 7 - Prob. 17RECh. 7 - Prob. 18RECh. 7 - Prob. 19RECh. 7 - Prob. 20RECh. 7 - Prob. 21RECh. 7 - BIOCHEMICAL CONNECTIONS How does Valium work?Ch. 7 - Prob. 23RECh. 7 - Prob. 24RECh. 7 - RECALL What is the function of a protein kinase?Ch. 7 - RECALL What amino acids are often phosphorylated...Ch. 7 - REFLECT AND APPLY What are some possible...Ch. 7 - REFLECT AND APPLY Explain how phosphorylation is...Ch. 7 - REFLECT AND APPLY Explain how glycogen...Ch. 7 - Prob. 30RECh. 7 - Prob. 31RECh. 7 - RECALL Name three proteins that are subject to the...Ch. 7 - Prob. 33RECh. 7 - RECALL What are caspases?Ch. 7 - REFLECT AND APPLY Explain why cleavage of the bond...Ch. 7 - REFLECT AND APPLY Why is it necessary or...Ch. 7 - Prob. 37RECh. 7 - Prob. 38RECh. 7 - Prob. 39RECh. 7 - RECALL What are the two essential amino acids in...Ch. 7 - RECALL Why does the enzyme reaction for...Ch. 7 - REFLECT AND APPLY Briefly describe the role of...Ch. 7 - REFLECT AND APPLY Explain the function of...Ch. 7 - REFLECT AND APPLY Explain why the second phase of...Ch. 7 - Prob. 45RECh. 7 - REFLECT AND APPLY An inhibitor that specifically...Ch. 7 - REFLECT AND APPLY What properties of metal ions...Ch. 7 - RECALL In biochemistry mechanisms, what group is...Ch. 7 - Prob. 49RECh. 7 - REFLECT AND APPLY Explain the difference between...Ch. 7 - Prob. 51RECh. 7 - Prob. 52RECh. 7 - Prob. 53RECh. 7 - REFLECT AND APPLY What is the relationship between...Ch. 7 - Prob. 55RECh. 7 - BIOCHEMICAL CONNECTIONS Why can cocaine addiction...Ch. 7 - Prob. 57RECh. 7 - Prob. 58RECh. 7 - RECALL How are coenzymes related to vitamins?Ch. 7 - RECALL What type of reaction uses vitamin B6?Ch. 7 - Prob. 61RECh. 7 - Prob. 62RECh. 7 - Prob. 63RECh. 7 - BIOCHEMICAL CONNECTIONS What are some of the ways...Ch. 7 - Prob. 65RECh. 7 - Prob. 66RECh. 7 - Prob. 67RECh. 7 - Prob. 68RECh. 7 - Prob. 69RECh. 7 - Prob. 70RECh. 7 - Prob. 71RECh. 7 - Prob. 72RECh. 7 - Prob. 73RE
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