1. You have the plasmid pUC18/19, which is a circular plasmid that consists of 2686 bp. What would the number of and length of the fragments be if you cut the plasmid with the following restriction enzymes or combination of enzymes? Give a schematic representation of the digestions. a. Pscl & Gsul b. Scal, Pdml & BsaXI c. Scal, Sspl & Ehel
Bacterial Genomics
The study of the morphological, physiological, and evolutionary aspects of the bacterial genome is referred to as bacterial genomics. This subdisciplinary field aids in understanding how genes are assembled into genomes. Further, bacterial or microbial genomics has helped researchers in understanding the pathogenicity of bacteria and other microbes.
Transformation Experiment in Bacteria
In the discovery of genetic material, the experiment conducted by Frederick Griffith on Streptococcus pneumonia proved to be a stepping stone.
Plasmids and Vectors
The DNA molecule that exists in a circular shape and is smaller in size which is capable of its replication is called Plasmids. In other words, it is called extra-chromosomal plasmid DNA. Vectors are the molecule which is capable of carrying genetic material which can be transferred into another cell and further carry out replication and expression. Plasmids can act as vectors.
 alt="Section B: Circular DNA
Plasmid map
Eco01091 2674 Pfol 46
BSTAPI 179
Aatil 2617
Ndel 183
Sspl 2501
Ehel 235
Pdml 2294
146/
236
lacz
Bcgl 2215
Scal 2177
\2486
MCS
469
PUC18/19
2686 bp
BsaXI 659
Sapl 683
852
AflI, Pscl 806
Gsul 1784
1626
Cfr101 1779.
Eco311 1766
Eam11051 1694
1466
Гер (pMB1)
BseYl 1110
\Cail 1217
Ed
Acs
CCT CCA GGT CGA CrC TAG AGG ATC CC GGG TAC CGA CCT CGA ATT CT MT CAT G07 CAT AGC TGT 7C CtG 3
ITA OTA CCA GTA TCI ACA ANG GC Y
3 C ATT TO Crs cOG
Lacz Val Val Al Leu
Ass The e et Thr Met
1. You have the plasmid pUC18/19, which is a circular plasmid that consists of 2686 bp,
What would the number of and length of the fragments be if you cut the plasmid with
the following restriction enzymes or combination of enzymes? Give a schematic
representation of the digestions.
a. Pscl & Gsul
b. Scal, Pdml & BsaXI
c. Scal, Sspl & Ehel
2. You have determined that the amplicon you want to clone has enzyme restriction sites
for Hindll and ECORI, After investigation you have seen that the PUC18/19 plasmid
also have these enzyme restriction sites in its multiple cloning site (MCS on map
above). After enzyme digestion your amplicon is 854 bp long.
6.
a. IWhat length will the recombinant plasmid be after you have inserted your
amplicon? Show your calculation.
b. In the amplicon insert you have an enzyme restriction site for Ndel at 500 bp.
If you digest the recombinant plasmid with this enzyme what length will the
fragments be?
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