Cyanobacteria are photosynthetic prokaryotes that are likely responsible for generating the gen-rich atmosphere we enjoy on Earth. Many species of cyanobacteria display "circadian rhythms" manifest as oscillations in gene expression with a period of -24 hours. The circadian rhythms are erned by a biochemical cascade that regulates the phosphorylation of a single protein. Remarkably, circadian "clock" can be reconstituted in vitro with only 3 proteins, known as KaiA, KaiB and KaiC. on addition of Mg²* and ATP to the reaction, KaiC cycles between being phosphorylated and hosphorylated and reproduces the 24 hour period in the absence of any light cues. In vivo in the nobacteria, the phosphorylation of KaiC peaks at night, and this results in the activation of genes oding components of the oxidative pentose phosphate pathway. Daytime photosynthesis KaiA KaiB Kaic ROS NADPH 80 ROS co, fikation and slycogen synthesis +ATP +Mg 60 Detoxification mechanisms 40 20 OPPP NADPH 24 time (hours) 72 Night-time oxidative pentose phosphate pathway carbon flux %P-Kaic

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2.
Cyanobacteria are photosynthetic prokaryotes that are likely responsible for generating the
oxygen-rich atmosphere we enjoy on Earth. Many species of cyanobacteria display "circadian rhythms"
that manifest as oscillations in gene expression with a period of -24 hours. The circadian rhythms are
governed by a biochemical cascade that regulates the phosphorylation of a single protein. Remarkably,
this circadian "clock" can be reconstituted in vitro with only 3 proteins, known as KaiA, KaiB and KaiC.
Upon addition of Mg2+ and ATP to the reaction, Kaic cycles between being phosphorylated and
dephosphorylated and reproduces the 24 hour period in the absence of any light cues. In vivo in the
cyanobacteria, the phosphorylation of KaiC peaks at night, and this results in the activation of genes
encoding components of the oxidative pentose phosphate pathway.
Daytime
photosynthesis
PSI ROS
KaiA
KaiB
Kaic
NADPH
80
ROS
co, fixation and
Blycogen synthesis
+ATP
60
Detoxification
+Mg
mechanisms
40
20
ОPPP
NADPH
24
48
72
time (hours)
colocoo
Night-time oxidative pentose
phosphate pathway carbon flux
(a)
reactants and products and enzymes (excluding the final isomerization step).
Draw the reactions of the oxidative phase of the pentose phosphate pathway including all
One hypothesis for why the oxidative pentose phosphate pathway is activated at night is to
(b)
prepare cyanobacteria for the accumulation of reactive oxygen species (ROS) generated during the
day by the light-harvesting reactions. Which product of the oxidative pentose phosphate pathway is
necessary to combat reactive oxygen species? What enzyme uses this product to combat ROS and
what antioxidant does it generate? Which particular ROS does the antioxidant target via a specific
enzyme, and what is the enzyme?
What other product does the oxidative pentose phosphate pathway produce, what is it used
(c)
for, and what daytime activity might production of this product prepare cynobacteria for?
%P-KaiC
Transcribed Image Text:2. Cyanobacteria are photosynthetic prokaryotes that are likely responsible for generating the oxygen-rich atmosphere we enjoy on Earth. Many species of cyanobacteria display "circadian rhythms" that manifest as oscillations in gene expression with a period of -24 hours. The circadian rhythms are governed by a biochemical cascade that regulates the phosphorylation of a single protein. Remarkably, this circadian "clock" can be reconstituted in vitro with only 3 proteins, known as KaiA, KaiB and KaiC. Upon addition of Mg2+ and ATP to the reaction, Kaic cycles between being phosphorylated and dephosphorylated and reproduces the 24 hour period in the absence of any light cues. In vivo in the cyanobacteria, the phosphorylation of KaiC peaks at night, and this results in the activation of genes encoding components of the oxidative pentose phosphate pathway. Daytime photosynthesis PSI ROS KaiA KaiB Kaic NADPH 80 ROS co, fixation and Blycogen synthesis +ATP 60 Detoxification +Mg mechanisms 40 20 ОPPP NADPH 24 48 72 time (hours) colocoo Night-time oxidative pentose phosphate pathway carbon flux (a) reactants and products and enzymes (excluding the final isomerization step). Draw the reactions of the oxidative phase of the pentose phosphate pathway including all One hypothesis for why the oxidative pentose phosphate pathway is activated at night is to (b) prepare cyanobacteria for the accumulation of reactive oxygen species (ROS) generated during the day by the light-harvesting reactions. Which product of the oxidative pentose phosphate pathway is necessary to combat reactive oxygen species? What enzyme uses this product to combat ROS and what antioxidant does it generate? Which particular ROS does the antioxidant target via a specific enzyme, and what is the enzyme? What other product does the oxidative pentose phosphate pathway produce, what is it used (c) for, and what daytime activity might production of this product prepare cynobacteria for? %P-KaiC
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