A fusion protein can be synthesized to carry a specific tag, which is useful in identifying the proteins in various experiments. Fusion proteins with the FLAG epitope bind to specific anti-FLAG antibodies and carry this extra sequence: Asp-Tyr-Lys-Asp-Asp- Asp-Asp-Lys. a. Draw the structure of the FLAG epitope at pH 7.0. b. As you have drawn it, what is the approximate net charge of the FLAG epitope at pH 7.0? c. How would the structure and net charge of the FLAG epitope change if placed into a pH 12.5 solution?

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5. A fusion protein can be synthesized to carry a specific tag, which is useful in identifying
the proteins in various experiments. Fusion proteins with the FLAG epitope bind to
specific anti-FLAG antibodies and carry this extra sequence: Asp-Tyr-Lys-Asp-Asp-
Asp-Asp-Lys.
a. Draw the structure of the FLAG epitope at pH 7.0.
b. As you have drawn it, what is the approximate net charge of the FLAG epitope at
pH 7.0?
c. How would the structure and net charge of the FLAG epitope change if placed
into a pH 12.5 solution?
Transcribed Image Text:5. A fusion protein can be synthesized to carry a specific tag, which is useful in identifying the proteins in various experiments. Fusion proteins with the FLAG epitope bind to specific anti-FLAG antibodies and carry this extra sequence: Asp-Tyr-Lys-Asp-Asp- Asp-Asp-Lys. a. Draw the structure of the FLAG epitope at pH 7.0. b. As you have drawn it, what is the approximate net charge of the FLAG epitope at pH 7.0? c. How would the structure and net charge of the FLAG epitope change if placed into a pH 12.5 solution?
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Amino acids are the biomolecules that contain amino and carboxyl groups. Proteins are the polymer of amino acids. These are linked via peptide bonds. 

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