Cut the following protein with the Serine Proteolytic enzyme Trypsin. How many peptide fragments are present after the protein is treated with Trypsin? Val-lle-Arg-Lys-Leu-Arg-Gly-Ala-Lys-lle O 10

Biochemistry
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Chapter1: Biochemistry: An Evolving Science
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### Protease Activity: Trypsin and Peptide Fragmentation

**Question:**
Cut the following protein with the Serine Proteolytic enzyme **Trypsin**. How many peptide fragments are present after the protein is treated with Trypsin?

**Provided Protein Sequence:**
Val-Ile-Arg-Lys-Leu-Arg-Gly-Ala-Lys-Ile

**Possible Answers:**
- ○ 5
- ○ 9
- ○ 10
- ○ 4

### Explanation:
Trypsin is a serine protease that specifically cleaves peptide bonds at the carboxyl side of the amino acids lysine (Lys) and arginine (Arg), except when either is followed by a proline (Pro).

Given the sequence: **Val-Ile-Arg-Lys-Leu-Arg-Gly-Ala-Lys-Ile**, let's identify the cleavage points:
- Trypsin will cleave after Arg (R) and Lys (K).
- The sequence has the following lysine and arginine residues: 
  1. Val-Ile-Arg (cleavage)
  2. Lys (cleavage)
  3. Leu-Arg (cleavage)
  4. Gly-Ala-Lys (cleavage)

We'll divide the sequence:
- **Val-Ile-Arg** (Trypsin cleaves after Arg → Fragment 1)
- **Lys** (Trypsin cleaves after Lys → Fragment 2)
- **Leu-Arg** (Trypsin cleaves after Arg → Fragment 3)
- **Gly-Ala-Lys** (Trypsin cleaves after Lys → Fragment 4)
- **Ile** (remains as the last fragment → Fragment 5)

**Result:**
- The protein will be cut into **5 fragments**.

**Correct Answer:** ○ 5
Transcribed Image Text:### Protease Activity: Trypsin and Peptide Fragmentation **Question:** Cut the following protein with the Serine Proteolytic enzyme **Trypsin**. How many peptide fragments are present after the protein is treated with Trypsin? **Provided Protein Sequence:** Val-Ile-Arg-Lys-Leu-Arg-Gly-Ala-Lys-Ile **Possible Answers:** - ○ 5 - ○ 9 - ○ 10 - ○ 4 ### Explanation: Trypsin is a serine protease that specifically cleaves peptide bonds at the carboxyl side of the amino acids lysine (Lys) and arginine (Arg), except when either is followed by a proline (Pro). Given the sequence: **Val-Ile-Arg-Lys-Leu-Arg-Gly-Ala-Lys-Ile**, let's identify the cleavage points: - Trypsin will cleave after Arg (R) and Lys (K). - The sequence has the following lysine and arginine residues: 1. Val-Ile-Arg (cleavage) 2. Lys (cleavage) 3. Leu-Arg (cleavage) 4. Gly-Ala-Lys (cleavage) We'll divide the sequence: - **Val-Ile-Arg** (Trypsin cleaves after Arg → Fragment 1) - **Lys** (Trypsin cleaves after Lys → Fragment 2) - **Leu-Arg** (Trypsin cleaves after Arg → Fragment 3) - **Gly-Ala-Lys** (Trypsin cleaves after Lys → Fragment 4) - **Ile** (remains as the last fragment → Fragment 5) **Result:** - The protein will be cut into **5 fragments**. **Correct Answer:** ○ 5
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