Consider ³H-labeled pyruvate (containing three ³H at C3) and ¹4C-labeled OAA (¹4C at C3) are added to apreparation of mitochondria in which pyruvate dehydrogenase and the citric acid cycle enzymes are functional.Assume the labeled compounds react to form citrate that is labeled with both ³H and ¹4C. Assume also that oncelabel is lost from a citric acid cycle intermediate that it does not become reincorporated.lfoxaloacetate (OAA)3H3H3Hpyruvate(a) Show the distribution of ³H and ¹4C in the citrate that is initially formed from the ¹4C-labeled OAA and the3H-labeled ACS-CoA.

Here we are tracking the hydrogen atoms in the methyl group of pyruvate and a carbon between two…

Answered: Consider ³H-labeled pyruvate…

Biochemistry

9th Edition

ISBN:9781319114671

Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Chapter1: Biochemistry: An Evolving Science

Section: Chapter Questions

Problem 1P

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give five biological effects of disorders of the citric acid cycle
Consider 3 molecules of galactose: (write only the whole number; no decimal places) How many turns of Krebs Cycle will these molecules undergo for complete oxidation? b. How many moles of ATP are produced upon complete oxidation via malate-aspartate shuttle? c. If all the galactose molecules oxidize via pentose phosphate pathway (oxidative stage only), how many moles of NADPH will be produced?
Malate dehydrogenase has a ΔGo′ΔGo′= 29.5 kJ/mol for the formation of oxaloacetate from malate yet plays a crucial role in the Citric Acid Cycle. Explain (briefly) how this enzyme with a very non-spontaneous ΔGo′ΔGo′can function well in a biochemical pathway.
(b) number of moles of ATP produced under aerobic glycolysis whereby pyruvate enters the mitochondrion for oxidative decarboxylation to generate acetyl-CoA that enters the citric acid cycle. Write the reac- tions for each step using words. They need not be balanced with respect to charge, protons released or consumed, and stoichiometry. Consider 2.5 ATP/NADH oxidized and 1.5 ATP/FADH2 oxidized. Enzymes need not be named. Compare the number of moles of ATP that are produced under anaerobic glycolysis to the Of the reactions producing ATP in the mitochondrion listed in part (b) above, which are not (c) influenced by the proton gradient across the inner mitochondrial membrane?
An investigator briefly incubates an actively respiring bacterial culture with [1-14 C]glucose and isolates the glycolytic and citric acid cycle intermediates. Where is 14 C located in each of the intermediates listed? Consider only the initial incorporation of 14C in the first pass of labeled glucose through the pathways. fructose 1,6-bisphosphate glyceraldehyde 3-phosphate phosphoenolpyruvate acetyl-CoA citrate ☐ ☐ ☐ ☐ ☐ ☐ ☐ a-ketoglutarate oxaloacetate Answer Bank C-4 C-1 C-3 C-2
Lactic acidosis, weakness, fatigue, and sleepiness are observed in patients with genetic defects of one if the enzymes of pyruvate dehydrogenase complex. Explain The causes of the elevation of lactate in the blood of such patients and the emergence of hypoenergetic state. For this purpose write the following: a) scheme of the metabolic pathway of glucose metabolism, that includes this reaction and calculates the energetic effect of the process, outlining the reactions coupled with the use and formation of ATP. b) reaction of the reduction of pyruvate and explain the reason for its acceleration inpatients that have such genetic defects.
What is the reduction potential (DE) for the reaction catalyzed by isocitrate dehydrogenase if the citric acid cycle is fluxing? To get the answer scored correctly: Please report the answer to three decimal places. Example: 0.123 or -0.111 Do not include units.
The first step of gluconeogenesis involves the carboxylation of pyruvate and has a large negative delta G (i.e very exergonic). Explain how it is possible that this step can be exergonic if we know that adding CO2 onto molecules is fundamentally a destabilizing phenomenon?
The citric acid cycle is shown. The methyl carbon in acetyl CoA is labeled with C14C14 (shown in red). Identify which of the carbons in each intermediate will be labeled in the first round of the cycle by selecting the indicated carbon(s). Each question has multiple options, answering with only one option is incorrect. Which carbon(s) in α‑ketoglutarate will contain C14? 1 2 3 4 5 Which carbon(s) in succinyl‑CoA will contain C14? 1 2 3 4 Which carbon(s) in succinate will contain C14? 1 2 3 4 Which carbon(s) in fumarate will contain C14? 1 2 3 4 Which carbon(s) in malate will contain C14? 1 2 3 4 Which carbon(s) in oxaloacetate will contain C14? 1 2 3 4
Suppose a liver extract capable of carrying out normal metabolic reactions (including gluconeogenesis) is incubated with pyruvate partially labeled with deuterium at the methyl group (see below: D= deuterium, i.e., H-2) a) Explain why the oxaloacetate formed in step 1 of gluconeogenesis is only partially labeled (i.e., some of the oxaloacetate is labeled and some is not). b) Where would the label be found in glucose?
Glucose 6-phosphate is also a precursor for the synthesis of nucleotides that are used to build DNA and RNA. The first step of this pathway is catalyzed by an enzyme called glucose 6-phosphate dehydrogenase. Assume that reactions in this pathway with double arrows are reversible under cellular conditions, while those with single arrows are effectively irreversible. Which of the following enzymes, if present in your fructose-6-phosphate solution, would most substantially decrease the amount of 6-phosphogluconolactone you produce? Phosphoglucomutase G6P Dehydrogenase G6P Isomerase Hexokinase PFK-1
Activation of the fatty acid (converting it to fatty acyl-SCoA) requires the expenditure of 2 ATPs. Use your answers from parts B and C to calculate the total number of ATPs generated from the metabolism of a saturated fatty acid with 18 carbon atoms including both the citric acid cycle and the ββbeta-oxidation pathway as well as the initial ATP required to produce the acyl-SCoA molecule that starts the process. Express your answer as an integer.

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