Biochemistry: Concepts and Connections (2nd Edition)
2nd Edition
ISBN: 9780134641621
Author: Dean R. Appling, Spencer J. Anthony-Cahill, Christopher K. Mathews
Publisher: PEARSON
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Textbook Question
Chapter 11, Problem 3P
a. NAD+ kinase catalyzes the ATP-dependent conversion of NAD + to NADP+ . How many reducing equivalents are involved in this reaction?
b. How many reducing equivalents are involved in the conversion of ferric ion to ferrous ion?
c. How many reducing equivalents are involved in reducing one molecule of oxygen gas to water?
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The carbon-nitrogen peptide bond is rigid, but rotation can take place
about the bond between the nitrogen and a-carbon atoms and the bond
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Consider the Ramachandran plot shown to answer both questions.
fr (degrees)
180
120
8280
60
°
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Which observation most likely describes part of an observed a helix?
p=-59 degrees; y = +150 degrees; many Ser residues
qp=-140 degrees; w +130 degrees; many Val residues
qp=-57 degrees; y = -47 degrees; many Pro residues
qp=-60 degrees; y = -47 degrees; many Ala residues
p = +60 degrees; y = +40 degrees; many Gly residues
Which observations would not likely occur in a ẞ sheet?
qp=-59 degrees; y = -49 degrees; many Ala residues
qp = +60 degrees; w = +60 degrees; many Gly residues
qp=-120 degrees; y = +120 degrees; many Tyr residues
☐ ☐
qp=-139 degrees; y = +135 degrees; many Val residues
op=-51 degrees; w+153 degrees; many Gly and Pro…
Please give an intuitive explanation of the difference, if any, between toxicokinetics and pharmacokinetics.
A protein biochemist attempted to determine the amino acid sequence of a decapeptide. The results from the trypsin,
chymotrypsin, and cyanogen bromide treatments are shown:
⚫ Trypsin digestion gave two fragments with multiple residues (not in order):
• T1: Ala, Arg, Phe, Gly, Thr, Trp, Tyr
o T2: Lys, Met, Val
Chymotrypsin digestion gave four fragments with multiple residues (not in order):
• CT1: Ala, Phe
• CT2: Thr, Trp
• CT3: Lys, Met, Tyr, Val
。 CT4: Arg, Gly
⚫ Treatment with cyanogen bromide yielded a single amino acid, methionine, and a nonapeptide.
What is a possible sequence of the decapeptide? Use three-letter abbreviations in your answer, and add a dash between
each residue.
Chapter 11 Solutions
Biochemistry: Concepts and Connections (2nd Edition)
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- Classify each description as corresponding to DNA or RNA. DNA a single molecule that can be over 10,000,000 nucleotides long Answer Bank usually single stranded RNA makes up the genome for eukaryotic organisms a single molecule that can form a complex secondary structure usually double stranded can be translated into a protein includes deoxyribose sugar includes the base uracilarrow_forwardA protein biochemist attempted to determine the amino acid sequence of a decapeptide. The results from the trypsin, chymotrypsin, and cyanogen bromide treatments are shown: • Trypsin digestion gave two fragments with multiple residues (not in order): T1: Ala, Arg, Phe, Gly, Thr, Trp, Tyr • T2: Lys, Met, Val ⚫ Chymotrypsin digestion gave four fragments with multiple residues (not in order): • CT1: Ala, Phe ° • CT2: Thr, Trp 。 CT3: Lys, Met, Tyr, Val • CT4: Arg, Gly ⚫ Treatment with cyanogen bromide yielded a single amino acid, methionine, and a nonapeptide. What is a possible sequence of the decapeptide? Use three-letter abbreviations in your answer, and add a dash between each residue. sequence:arrow_forwardClassify each nucleotide or nucleoside by the type of base and sugar present in each image. HO. -CH₂ 0 NH₂ OH OH OH он NH Classify the molecule. Opurine, deoxyribose purine, ribose Opyrimidine, deoxyribose pyrimidine, ribose NH₂ Classify the molecule. purine, deoxyribose Opyrimidine, ribose Opurine, ribose pyrimidine, deoxyribose H₂C. ·CH₂ NH Classify the molecule. pyrimidine, ribose Opurine, deoxyribose O purine, ribose Opyrimidine, deoxyribose OHarrow_forward
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- Which of these amino acids have R groups that have hydrogen-bonding potential? Ser Ile Glu Tyr Ala Thrarrow_forwardSelect the true statements about SDS-PAGE, a method of separating proteins. Assume that SDS-PAGE is performed under reducing conditions. Proteins are visualized using a dye that binds to the gel matrix, but not to proteins. Protein-SDS complexes have similar mass to charge ratios; therefore, separation is by size. Proteins are separated in a polyacrylamide gel matrix. Protein-SDS complexes migrate toward the negative electrode. Smaller proteins migrate faster through the polyacrylamide gel. Sodium dodecyl sulfate binds proteins, resulting in SDS-protein complexes that are similar in size.arrow_forwardClassify each feature as charactistic of DNA polymerase or RNA polymerase. DNA polymerase RNA polymerase Answer Bank uses deoxyribonucleoside triphosphates does not need a primer needs a primer uses ribonucleoside triphosphates exhibits semiconservative replicationarrow_forward
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