What if you designed a CRISPR/cas9 assay for a gene knockout, but there's no PAM sequence immediately downstream of your target site. What happens?  It's fine because you put the PAM sequence in your guide RNA     PAM sequences only apply to real viral infections, not CRISPR assays.      The Cas9 nuclease won't cut at the target site     The guide RNA won't be complementary to the target

Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
Publisher:Elaine N. Marieb, Katja N. Hoehn
Chapter1: The Human Body: An Orientation
Section: Chapter Questions
Problem 1RQ: The correct sequence of levels forming the structural hierarchy is A. (a) organ, organ system,...
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What if you designed a CRISPR/cas9 assay for a gene knockout, but there's no PAM sequence immediately downstream of your target site. What happens? 

It's fine because you put the PAM sequence in your guide RNA

   

PAM sequences only apply to real viral infections, not CRISPR assays. 

   

The Cas9 nuclease won't cut at the target site

   

The guide RNA won't be complementary to the target

   

They'll be more off target effects but it'll still work. 

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