If so, how can we confirm whether the protein is purified and how to increase its purity?

Biochemistry
9th Edition
ISBN:9781319114671
Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
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Can we purify mCherry protein (His-tag attached) with immobilised metal ions affinity chromatography (Ni-IDA)? If so, how can we confirm whether the protein is purified and how to increase its purity?

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Step 1Introduction

Chromatography

  • In 1906, chromatography was introduced by Michael Tswett to separate chlorophyll pigments.
  • It is a technique of separation of substances on the basis of their partition coefficients in two phases which are immiscible.
  • One phase is called a stationary phase and another one is the mobile phase. 
  • Separation occurs according to the affinity of substances to mobile or stationary phase. 

 

Metal Ions Affinity Chromatography

  • It is a technique in which the molecule of interest is dissolved in the mobile phase and in the stationary phase metals are bound. 
  • It is also called IMAC (Immobilized Metal Ion Affinity Chromatography) in which protein of interest are separated due to the binding of certain amino acids to metals on the stationary phase. Metals are immobilized in the stationary phase. 
Step 2 Purification of protein

Yes, it is possible to purify mCherry Protein which is His-tag with Metal Affinity Chromatography. 

 

  • In most cases, histidine is exploited to bind the metal attached to the column.
  • Copper, cobalt, and nickel are generally immobilized on the column. 
  • When a histidine-tagged protein comes in contact with nickel immobilized on the column, the histidine will chelate the metal ion through coordinate bonding. Whereas the protein which is not tagged with histidine will bind weakly to the nickel, hence can be washed off easily after washing with elution buffer. On the contrary, His-tag Protein will remain bound to the column and can be separated by this affinity chromatography. 
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