adapted Figure Facts template _Round and Campbell 2013_

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Jan 9, 2024

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Author/Year: Audrey Luo, Falk W. Lohoff/ 2019 Study question: How does excessive drinking affect biomarkers used to predict epigenetic age? Figure H: Based on the graph’s heading , what is the hypothesis ? A: What do the axes of the graph represent? L: What does the legend tell us about the graph T: What are the scientists changing in this experiment? What can we conclude from the data? Figure 1 Epigenetic age acceleration in AUD. - x-axis: AUD levels. - y-axis: Levine DNAm acceleration and age levels. - Symbols and colors representing AUD & HC. - Error bars representing variability - Explains the dependent and independent variable. Levine DNAm acceleration and age levels, are changing in this experiment. There is a correlation between AUD and Levine DNAm PhenoAge Figure 2 Manhattan plot shows the meta- analysis P -values combining the results of EA and AA AUD GWAS based on a fixed effect model using weight of inverse variance. - y-axis: reports log transformed meta P- values. - The horizontal dashed line corresponds to the genome-wide association threshold - All SNPs in APOL2 were colored with red. EA and AA studies comprised of 154 AUD EA and 156 AUD AA individuals. transformed meta P-values in chromosomes. APOL2 is identified by GWAS of EAA Figure 3 Regional association plot of APOL2 associate d with epigenetic age acceleration. - The y - axis shows the log- transformed meta-analysis P - value. The colors represent linkage disequilibrium (LD) R 2 . Epigenetic age acceleration is changing in log- transformed meta-analysis. APOL2 is associated with epigenetic age acceleration. Figure 4 Association of rs916264 genotype with APOL2 mRNA exon specific expression in the 10 - The x - axis describes the genotype group of rs916264 - HIPP stands for hippocampus - WHMT for intralobular Measurements of AA, AC, and CC may vary when AA, AC, and CC would have error bars which
brain tissues. across the 10 brain tissues. - The y-axis is a log2 transformed expression scale. matter - MEDU for medulla - FCTX for frontal cortex - CRBL for cerebella cortex - OCTX for occipital cortex - PUTM for putamen - SNIG for substantia nigra - TCTX for temporal cortex - THAL for thalamus measured in the different places of the brain. would vary and different p values which would affect correlation between the two variables, when measured in different areas of the brain. Adapted from: Jennifer E. Round and A. Malcolm Campbell. Figure Facts: Encouraging Undergraduates to Take a Data-Centered Approach to Reading Primary Literature. CBE—Life Sciences Education  2013  12 :1 ,  39-46 
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