ND STONY BROOK UNIVERSITY LOOSELEAF GENETICS: FROM GENES TO GENOMES
ND STONY BROOK UNIVERSITY LOOSELEAF GENETICS: FROM GENES TO GENOMES
6th Edition
ISBN: 9781260406092
Author: HARTWELL, Leland, HOOD, Leroy, Goldberg, Michael
Publisher: Mcgraw-hill Education/stony Brook University
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Chapter 15, Problem 26P

Many clinically relevant mitochondrial diseases are caused by mutations in mitochondrial genes affecting tRNAs. For example, one form of MELAS (mitochondrial myopathy, encephalopathy, lactic acidosis and stroke-like episodes) is caused by a point mutation in the gene encoding the mitochondrial tRNA whose anticodon recognizes the codons 5′ UUA and 5′ UUG. The mutation makes the aminoacylation of this tRNA inefficient.

a. The rate of synthesis of most mitochondrial proteins is either unaffected or slightly decreased in MELAS cells, but one mitochondrial protein called NAD6 is synthesized at only 10% of the normal rate. How is it possible that the translation of this single mitochondrial protein might be affected specifically?
b. Why might the decreased translation of this one protein be responsible for the pathological condition?
c. Researchers are currently investigating ways to treat the symptoms of MELAS patients. One strategy involves a change to a nuclear gene. What nuclear gene might the investigators be targeting? (Assume that you can make any desired change to nuclear genes; we will describe methods to alter genomes in Chapter 18.)
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Explain the significance of the following statement: The functioning of the aminoacyl-tRNA synthetases is referred to as the second genetic code.
Many blood clotting proteins undergo a post-translational modification in which specific glutamic acid residues (Glu) in the protein are converted to gamma-carboxyglutamic acid residues (Gla). See reaction scheme below. An example is the blood clotting protein Factor IX, which has 12 Glu in its N-terminus converted to Gla. This modification gives Factor IX the ability to bind calcium and phospholipid membranes. Bacteria do not have the enzyme required to convert Glu to Gla and therefore Factor IX proteins expressed in bacteria would not have the proper modifications. How might you engineer the translational apparatus of a bacterial cell line so that it produces Factor IX with Gla in the appropriate positions. How would you ensure that only the 12 Glu in Factor IX that are normally converted to Gla and not just all Glu (Limit 5-6 senetnces)?
Describe the two sequential reactions that occur in the activesite of aminoacyl-tRNA synthetases.

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ND STONY BROOK UNIVERSITY LOOSELEAF GENETICS: FROM GENES TO GENOMES

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