You design a guide RNA to target your gene of interest, which you will express attached to a scaffold RNA. You transform cells with Cas9, the guide+scaffold RNA, and an HDR template. The HDR template codes for the insertion of a premature stop codon located 10 bp upstream of the Cas9 cut site, a base pair substitution 15 bp upstream of the Cas9 cut site, and a base pair substitution in the PAM sequence. Question: Is this scenario “possible” or “not possible”? Cas9 cuts the target site, the stop codon and the two base pair substitutions are introduced.

Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
Publisher:Elaine N. Marieb, Katja N. Hoehn
Chapter1: The Human Body: An Orientation
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You design a guide RNA to target your gene of interest, which you will express attached to a scaffold RNA. You transform cells with Cas9, the guide+scaffold RNA, and an HDR template. The HDR template codes for the insertion of a premature stop codon located 10 bp upstream of the Cas9 cut site, a base pair substitution 15 bp upstream of the Cas9 cut site, and a base pair substitution in the PAM sequence.

Question: Is this scenario “possible” or “not possible”?

Cas9 cuts the target site, the stop codon and the two base pair substitutions are introduced.

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