6. Which of the following statements concerning the BLOSUM62 substitution matrix is correct? a. Ala is aligned with Arg more often than expected by chance. b.Ala is never substituted by Cys. c. Tryptophan is substituted less frequently than any other amino acid.

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6. Which of the following statements concerning the BLOSUM62 substitution matrix is correct?
a. Ala is aligned with Arg more often than expected by chance.
b.Ala is never substituted by Cys.
c. Tryptophan is substituted less frequently than any other amino acid.

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Introduction:

For BLASTP, the default scoring matrix is the BLOSUM62( BLOcks SUBstitution Matrix)matrix. By examining the rates of amino acid alterations in collections of related proteins, the BLOSUM62 matrix was created. When two proteins were aligned, the amino acid sequences inside each cluster, or block, were at least 62% identical.

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