QILIN_GUAN_-_Lab_23_-_Primate_Evolution_Cladistics_and_Bioinformatics
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San Jose State University *
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120
Subject
Anthropology
Date
Jan 9, 2024
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Lab #24
Primate Evolution, Cladistics, and Bioinformatics
Date: 4/19/21
Purpose:
1.
Observe and compare specific skeletal features of various primate species
2.
Evaluate evolutionary trends and relatedness among species based on both morphological and
biochemical factors
3.
Construct a cladogram highlighting these traits
Part A: Cladistics Based on Morphological Data
●
You may find it helpful to watch
this video
before beginning this section or while you work.
●
Visit this
website
to explore some primate skeletons. You will NOT need to examine all the species
available, just the ones in the table. I have blacked out some traits to help you make efficient use of the
information.
Trait
Tarsier
Human
Squirrel
Monkey
Gorilla
Orangutan
Slow Loris
Chimpanzee
Gibbon
Baboon
Grasping fingers
yes
yes
yes
yes
yes
yes
yes
yes
yes
Opposable
thumbs
no
yes
no
yes
yes
yes
yes
yes
yes
Binocular vision
yes
yes
yes
yes
yes
yes
yes
yes
yes
Relatively small
eyes
no
yes
no
yes
yes
no
yes
yes
yes
2.1.2.3 dentition*
no
yes
yes
(2.1.3.3
)
yes
yes
no
yes
yes
yes
No tails
tail
No tail
tail
No tail
No tail
No tail
No tail
No tail
tail
Average size
> 50 lbs
no
yes
no
yes
yes
no
yes
no
yes
Minimal sexual
dimorphism
yes
yes
yes
yes
Pelvis: short/wide
or long/narrow
long
short
long
short
short
long
short
short
long
S-shaped spine
no
yes
no
no
no
no
no
no
no
No opposable
big toe
yes
yes
no
no
no
no
no
no
no
*Dentition refers to how their teeth look. 2.1.2.3 refers to how many of each TYPE of teeth a species has in a
single quadrant - in this case, 2.1.2.3 would indicate 2 incisors, 1 canine, 2 premolars, and 3 molars (this would
be 4 incisors, 2 canines, 4 premolars and 6 molars on a single jaw). Some primates have 2.1.2.3, while others
have 2.1.3.3. If you are having trouble, just count the total number of teeth for these ones.
Analysis:
●
Answer each of these questions THOROUGHLY (you should end up with about a paragraph for each).
Make sure that any claims you make have evidence, either rooted in your observations and/or found on
the eskeletons website.
1.
What traits set primates apart from other mammal species? Give a description of how those traits
provide advantages in the primates’ environment.
The traits that set primates apart from other mammal species are grasping fingers and binocular visions.
Based on the table I’ve created, all nine of the primates have grasping fingers and binocular visions. This
shows that mostly all primates have these two traits and when species have these two traits, you can easily
see them as primates. Since most primates climb trees or live in forest environments, having grasping
fingers allows them to grab on branches easily and grab other things like food. Binocular visions allow
primates to see things at a much deeper perception, which allow them to focus on something clearly.
2.
What information can be gained from the relative size and shape of the eye? What predictions about
the primates’ lifestyles can we make, and how might the evidence support that claim?
Primates with small size bodies and weight can tell us that they climb and live on trees. Smaller primates
climb trees because they are small and trees are able to handle their weight. Primates that live on trees also
swing around and their low weight allow them to do it easily. Larger primates live on land and don’t swing
around trees. Because they’re bigger, their body weights are heavier, which make climbing and living on
trees harder. Primates with big eyes allow more light to enter the retinas and result in seeing better in the
dark and have a higher resolution. Tarsier is a primate that has big eyes; it can see better in the dark which
tells us that a tarsier hunts at night.
3.
What trends do you notice in the teeth and jaws of these primates? Describe specifically what the
dentition tells you about the lifestyle of these animals and how their bodies worked. Compare this with
other groups of mammals if you’d like.
Most of the primates –except tarsier and slow loris– have 2.1.2.3 dentitions which include incisors, canine,
premolars, and molars. Having these different teeth indicate that these primates have several sources for
food. They are able to eat hard food using their premolars and molars. The Canine helps tear food apart
while the incisor helps with cutting the food or biting. With different types of teeth these primates have the
choice to eat fruits, nuts, plants, or meat. Their bodies will take in proteins from all sorts of food sources.
4.
What predictions can be made about the primates’ lifestyle based on their size, tails, and limbs? How
does each piece of evidence support that claim?
Based on the size, bigger and heavier primates stay on land more than climbing trees. For example, gorillas
are relatively big so stay on land more but they also climb trees and sometimes sleep there. Tails in primates
are used for balancing and sometimes for grasping branches. The individuals in the table with tails mostly
likely hangout on trees more often than on land. For example, tarsiers are small and they jump from one tree
to another easily because of their size and also the tails help them balance the landing. Gibbons’ lifestyle are
mostly swinging around which is why their limbs for their arms are longer than other primates.
5.
What is sexual dimorphism? Why do you think some species show extensive sexual dimorphism and
others do not?
Sexual dimorphism is differences in size, appearance, and sexual organs between the sexes of an animal.
Some species show extensive sexual dimorphism because (mostly) the females chose the males with the
better appearance. Their offspring would have a high chance of inheriting those popping appearances. As
this continues, the less better looking traits will decrease as no females would want to mate with them. The
others that don’t show extensive sexual dimorphism might be caused by the percentage of the offspring
inheriting traits from the maternal and paternal alleles.
6.
Which of the species examined walk upright? What evidence supports this claim?
Only humans walk upright even though other primates do go on their two legs but humans are the only one
that only walk on two. The spine of the primate is a factor of how they walk. Humans are the only one that
have an s-spine which makes us bipeds. Additionally, our legs are much longer than our arms, therefore it’s
hard for us to be quadrupeds.
Cladogram
:
●
Create a cladogram of the species you examined today using the information you gathered. Be sure to
label which traits you analyzed, and identify the species by their complete name. You do not need to
include every single trait, but you must place all 9 species. Justify your choices in writing (Why did you
value these traits? How are they important in showing relatedness and ancestry?)
Attach your cladogram here
Justify your choices in writing here
Part B: Cladistics Based on Biochemical Data
●
Open the
spreadsheet here
. This is the hemoglobin-β amino acid sequencing for the same groups of
primates. You might want to make a copy of the spreadsheet so that you can edit it as you work.
●
Count the number of differences in the amino acid sequencing between any two species (highlighted
columns) and record in the data table below. You may want to start with humans and work your way
down. Hiding the rows as you go or rearranging them might help as well.
●
The numbers will be repeated -- for example, the differences between gorillas and chimpanzees and
chimpanzees and gorillas will be the same.
spreadsheet
Human
Tarsier
Gorilla
Chimpanzee
Slow Loris
Ruffed
Lemur
Squirrel
Monkey
Orangutan
Gibbon
Baboon
Human
0
14
1
0
11
10
7
2
3
8
Tarsier
14
0
15
14
16
17
17
12
14
16
Gorilla
1
15
0
1
12
9
6
3
4
7
Chimpanzee
0
14
1
0
11
10
7
2
3
8
Slow Loris
11
16
12
11
0
15
13
9
9
12
Ruffed Lemur
10
17
9
10
15
0
7
9
8
7
Squirrel
Monkey
7
17
6
7
13
7
0
6
6
3
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Orangutan
2
12
3
2
9
9
6
0
2
7
Gibbon
3
14
4
3
9
8
6
2
0
5
Baboon
8
16
7
8
12
7
3
7
5
0
Cladogram:
●
Create a new cladogram based on this new information.
Conclusion
:
Use these prompts to help guide your writing.
●
How do the traits we examined help differentiate between species? What other traits could we have
observed?
●
How similar or different are the cladograms you built? In what ways can morphological data be
valuable? In what ways is it limited?
●
Explain how reproductive isolation creates biodiversity and can result in speciation.
●
What mechanisms lead to reproductive isolation?
●
How do the primate species you observed demonstrate these processes?
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