2. Indicate whether each of the following statements describes a reversible competitive inhibitor,reversible noncompetitive inhibition, or an irreversible inhibitor.a. It bonds covalently to the active siteb. The inhibitor effect can be reversed by the addition of more substratec. Inhibitor structure resembles that of the substrated. The inhibitor and substrate cannot bind to the enzyme simultaneously.

Enzymes are usually protein molecules which catalyzes the biochemical reaction by decreasing its…

Answered: 2. Indicate whether each of the…

Biochemistry

9th Edition

ISBN:9781319114671

Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Chapter1: Biochemistry: An Evolving Science

Section: Chapter Questions

Problem 1P

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Which one of the following best explains the distinctive effect of an uncompetitive inhibitor on Km, according to our coverage? If S binds first, I may never bind and P can be formed. When ESI complexes form, S is trapped and it is as though there is a lower concentration of E.
4. Compare and contrast the mechanism used by competitive and noncompetitive enzyme inhibitors. Which type of inhibitor can be "out-competed" by adding extra substrate to a reaction?
2. An enzyme-catalyzed reaction is carried out at several different substrate concentrations (listed below), either (1) with no inhibitor, or (2) in the presence of an inhibitor, I, at 0.63 g/L. Given the following data, determine: A. what type of inhibitor I is B. the value of Ki No Inhibitor: With Inhibitor: Substrate Concentration (g/L) 0.86 Reaction Velocity (g/L-s) Reaction Velocity (g/L-s) 0.179 0.161 2.35 3.80 4.90 6.10 18.4 0.398 0.567 0.666 0.726 0.950 0.322 0.407 0.443 0.495 0.639
3. Enzyme specificity. To determine the specificity of substrate binding for a particular enzyme/protein, structurally related compounds may be used as potential substrates and Km values may be calculated. However, many compounds structurally related to the substrate may bind to the active site but cannot be converted to product. In these instances, the substrate analogs are used as potential competitive inhibitors of substrate binding. Low K, values indicate high affinity of the enzyme for the inhibitor, whereas high K,values indicate low binding affinity. Consider the enzyme xanthine oxidase, which catalyzes the formation of uric acid from the purine bases hypoxanthine or xanthine in humans. The Km for hypoxanthine is 15.0 μM and for xanthine it is 45.0 μM. A few compounds used as competitive inhibitors of the normal substrate hypoxanthine are listed in the table below with their K; values. Comparing the structures of hypoxanthine with the listed substrate analogs, what can you…
1. ( . tion can be represented by the so-called Michaelis equation ) The velocity of an enzyme catalyzed reac- Vmax [S] Vo = Km Vo = max kcat [Eo] [So] (Км + [Sol) V max where [So] is the initial substrate concentration, [Eo] is the total enzyme concentration, kcat is the cataly- tic rate constant or turnover number, and KM repre- sents the Michaelis constant. The graph on the right illustrates the dependence of the velocity of the reaction as a function of substrate concentration. Ex- Km [S] (mm) plain why the maximal velocity can be represented by the expression Vmax = Kcat [Eo] at very high substrate concentrations. Vo (µm/min)
8.Choose the False statement about enzyme binding sites Binding at an allosteric site ca affect binding and catalysis at the Ortho steric site. In addition to ortho steric sites , some enzymes have other sites where catalysis can be conducted. They are called , allosteric sites, from “allo,” the other. In principle, allosteric ligands can have structures that do not resemble those of substrates. Ligand binding at an allosteric site can cause a conformational change of an enzyme. Enzyme can be inhibited by an allosteric ligand that does not complete with substrate.
1. Describe the two ways by which the activity of an enzyme can be inhibited.
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There is an enzyme inhibition mechanism that is not too detrimental when viewed from the size of Km, namely the inhibition mechanism.... A. non-competitiveB. non-competitive and uncompetitiveC. in-competitive and uncompetitiveD. in-competitiveE. uncompetitive
3. Which of the following statements regarding enzymes and transition states is true? a. stabilization of the transition state must be less than stabilization of ES for catalysis to occur b. binding of substrate to an enzyme often causes strain, thus promoting transition state formation c. the transition state conformation of an enzyme catalyzed reaction is identical to the conformation seen in the uncatalyzed transition state d. formation of the transition state always assures that the reaction will proceed to product e. none of the above are true 4. What is the starting point for selection of a suitable ion-exchange chromatography matrix for purification of a recombinant protein? a. Prediction of isoelectric point (pl) from the amino acid sequence. b. Test protein binding to an ion-exchange matrix at a range of pHs and salt concentrations. c. Test protein binding to a selection of anion and cation exchange matrices. d. Pass your sample through a preparative column and elute with a…
14. In competitive inhibition, an inhibitor— binds reversibly at the active site. binds to both free enzyme and the ES complex. binds at several different sites on an enzyme. binds only to the ES complex. binds covalently to the enzyme.

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2. Indicate whether each of the following statements describes a reversible competitive inhibito reversible noncompetitive inhibition, or an irreversible inhibitor.