1.1.2.A Research

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Activity 1.1.2 Research and Documentation Introduction As you explore the world of science and medicine, you will need an arsenal of resources to help you visualize existing technology and design the innovations of the future. Successful completion of each mission task hinges on a strong knowledge of the problem based on credible information. As you embark on each mission, you must research the scope of the problem, analyze solutions already available, and visualize features of your new design. In your biomedical science courses, you have learned techniques for researching current medical topics. As you delve a bit deeper into published scientific work, you will examine scientific journals in more detail. Tips for researching current topics will help you as you progress through the course and as you write your own scientific papers. In this activity you will complete a scavenger hunt as you explore online research tools, consider the composition of research articles, and review how to summarize and document credible sources. You will also review how to assess the integrity of information presented in Internet websites. Equipment Computer with Internet access Laboratory journal Activity 1.1.2 – Student Response Sheet – Research and Documentation Scavenger Hunt PLTW Biomedical Science Documentation Protocol handout PLTW Biomedical Science Outlining and Summarizing Guidelines handout Procedure 1. Review the Documentation Protocol and the Summarizing and Outlining Guidelines that you used in the previous three courses. Find copies of these documents in your laboratory journal, in your mission file, or obtain additional copies from your teacher. 2. In your laboratory journal, list two pros and two cons of using the Internet to research current science topics. Refer to your experience in the other biomedical science courses. 3. Brainstorm ways that you can determine whether a website is credible. Think back to research you have completed in your previous PLTW classes. Record your ideas in your laboratory journal and discuss these features with a partner. 4. Obtain an Activity 1.1.2 Student Response Sheet - Research and Documentation Scavenger Hunt from your teacher or from the mission file. 5. Complete the scavenger hunt as described on the resource sheet. Explore available databases that you may use this year as you complete research for each mission. Begin to think about strategies that you will use to move from a simple topic, to a research question, to an innovative solution. © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 1
6. Use the resources that you explored in the scavenger hunt to locate two reliable articles, one from a scientific journal and one from a news source. The resources should relate to the goal of the emergency services mission. a. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3021905/ b. https://bmcemergmed.biomedcentral.com/articles/10.1186/1471-227x-11-1 6 7. Summarize one of the two articles using the Summarizing and Outlining Guidelines handout. Attach your typed summary (including a proper citation) and the original article to this resource sheet. a. According to the Emergency department triage: an ethical analysis article, written by Ramesh P Aacharya, Chris Gastmans & Yvonne Denier, ethical dilemmas arise from the consequences of inadequate triage in emergency departments, such as delayed treatment, breach of privacy and confidentiality, inadequate communication between doctors and patients, failure to provide necessary care, or even the decision of whose life to save. Triage influences respect of autonomy. Autonomy is very difficult to assess especially when urgent situations arise. However, refusing to provide a patient who arrives at the ED with immediate medical attention goes against the idea of respecting their autonomy. Nonmaleficence, meaning “do no harm”, should also be considered when developing a ED triage. Triage does not directly cause harm, unless patients with severe injuries are classified as dead. Long wait times for consultations can worsen outcomes, cause more agony and suffering, and consequently cause indirect harm. Health care workers must practice beneficence, which is a positive action performed for the benefit of others rather than just abstaining from harmful acts. It is based on the moral obligation to contribute to the benefit or well-being of people. Lastly, justice focuses on equity, not equality. Distributive justice indicates that decisions about resource allocation are to be made fairly in light of the limited resources available. Aacharya, Ramesh P, et al. “Emergency Department Triage: An Ethical Analysis - BMC Emergency Medicine.” BioMed Central , BioMed Central, 7 Oct. 2011, bmcemergmed.biomedcentral.com/articles/10.1186/1471-227X-11-16. 8. Answer the Conclusion questions. Scavenger Hunt: Use the New England of Journal Medicine (NEJM) and complete the following: 1. Search for articles relating to Severe Acute Respiratory Syndrome (SARS) . Make sure to keep “free full original articles” in your search. © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 2
a. Scroll down the list of results and choose an original article that is available in full text. b. Write the citation for this article in the proper format. Refer to the Citing Sources resource for information on properly citing sources. Chalkias, S., Harper, C., Vrbicky, K., Walsh, S. R., Essink, B., Brosz, A., McGhee, N., Tomassini, J. E., Chen, X., Chang, Y., Sutherland, A., Montefiori, D. C., Girard, B., Edwards, D. K., Feng, J., Zhou, H., Baden, L. R., Miller, J. M., & Das, R. (2022). A Bivalent Omicron-Containing Booster Vaccine against Covid-19. New England Journal of Medicine . https://doi.org/10.1056/nejmoa2208343 c. Review any of the listed resources from your search. Is SARS spread by a virus or a bacterium? List the name of the virus or bacterium in your laboratory notebook. Provide a proper citation for your source (if different from your source in the previous step). SARS is spread by a virus. The name of the virus is coronavirus. 2. Search for an article related to the BRCA1 mutation and cancer. a. Choose one original article. Provide the citation in your laboratory notebook in the proper format. Coleman, R. L., Fleming, G. F., Brady, M. F., Swisher, E. M., Steffensen, K. D., Friedlander, M., Okamoto, A., Moore, K. N., Efrat Ben-Baruch, N., Werner, T. L., Cloven, N. G., Oaknin, A., DiSilvestro, P. A., Morgan, M. A., Nam, J.-H., Leath, C. A., Nicum, S., Hagemann, A. R., Littell, R. D., & Cella, D. (2019). Veliparib with First-Line Chemotherapy and as Maintenance Therapy in Ovarian Cancer. New England Journal of Medicine , 381 (25), 2403–2415. https://doi.org/10.1056/nejmoa1909707 © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 3
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b. Review the abstract for this article. The abstract is a brief summary of a scientific paper. c. List the four sections of an article abstract published in the New England Journal of Medicine . Next to each section, provide a phrase that describes the role of this section. Background- context of the study Methods- their process to get the answer Results- what they discovered Conclusion- what the results mean d. Using the information presented in the abstract, come up with one testable research question related to the findings of this study. Can the use of poly(adenosine diphosphate [ADP]–ribose) polymerase inhibitors in early treatment of patients with high-grade serous ovarian carcinoma help increase the length of progression-free survival? Google Scholar 1. Visit the database of scholarly articles available at Google Scholar . Some full articles are available directly in PDF format. For other articles, you may have to follow the link to the original source to determine whether the abstract or full-text article is available. 2. For two of the following independent project ideas, list the keyword or words that you would use to begin a search for relevant articles or resources. © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 4
a. James is interested in investigating how chemicals in the environment, mainly in the water or in the air, affect human body system function and overall human health. chemicals in atmosphere and effect on health b. Margot is interested in investigating new technology or treatments being developed or tested to provide better quality of life to war veterans who have list limbs or have experienced posttraumatic stress. c. Finn is interested in investigating alternative methods for smoking cessation that do not involve medication. holistic smoking cessation d. Kerry is interested in comparing HIV prevention strategies in developing nation and in poorer communities in the United states in order to develop a prevention plan for her local community. e. Choose one of the four topics above and find two articles using Google Scholar that relate to this topic. One of the articles should be a full-text article. Provide the title of each article as well as one-to-two-sentence summary of the content. Endocrine disrupting chemicals in the atmosphere: Their effects on humans and wildlife - Endocrine disrupting chemicals (EDCs) can disrupt hormone functions when inhaled, leading to health issues like infertility, early puberty, obesity, diabetes, and cancer. The article discusses major EDCs found in the air and the potential risks to both humans and wildlife that they create © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 5
Atmospheric Aerosols: Composition, Transformation, Climate and Health Effects - Small particles, whether natural or from human activities, play a crucial role in influencing atmospheric chemistry, climate, and human health. - f. Use Google Scholar to locate the following article. Sulheim, S., Holme, I., Ekeland, A. (2006). Helmet use and risk of head injuries in alpine skiers and snowboarders. The Journal of the American Medical Association, 295 (8), 919-924. i. Describe how the journal article is organized. Read through the paper and note the main topic headings. a. The journal article is organized in a way that showcases the steps following an experiment. Methods, results, and commentary for improvement is explained in detail. Under the main topics, there are also subtopics that help with understanding the process. ii. Describe the study methodology , the procedure followed by the investigators. How were subject groups organized? How was data collected? a. The study was based on anonymized data b. An injury was recorded when a skier or snowboarder was treated by the ski patrol or first aid staff. iii. Compare the format of the abstract in this article to the format of the article you reviewed from the New England Journal of Medicine . Are there headings in the abstract? If so, how do they differ? What aspects do abstracts have in common regardless of format? a. This article had easier wording and a more concise abstract. It did, however, include a lot of research findings and went into a lot of depth. The article I read from NEJM had a more scientific approach in its abstract and was relatively short. Both abstracts had context, conclusion, and results. This article’s abstract had one more part ,though. © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 6
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News Media National and local news sites also provide information about current issues in health and medicine. 1. Locate one interesting science or medicine article in an online newspaper or on an online news site ( NY Times, USA Today, CBS News, Fox News, ABC News ) that has been posted in the past week. Provide a citation for this article. Stojan, J. (2023b, October 4). Car-T therapy in treating different cancer types: A deep dive into cytomed therapeutics . USA Today. https://www.usatoday.com/story/special/contributor-content/2023/09/14/car-t-the rapy-in-treating-different-cancer-types-a-deep-dive-into-cytomed-therapeutics/7 0855057007/ 2. Describe how this article related to a health-related challenge discussed in class in Activity 1.1.1. This article relates to one of the five major health related issues from activity 1.1.1 in that it is related to cancer. Cancer is an immense problem within our world today and affects many people, but there is not an exact cure yet. The article discusses that cancer is a wide variety of diseases, each with its specific characteristics. It explains a new innovation, CytoMed Therapeutics, which utilizes the patient’s T cells to recognize and destroy cancer cells, essentially transforming the immune system into a sort of weapon against cancer. Reflection Question : Think about the way in which scientific information is presented in journal articles and the way in which the information is presented in popular news media. What are the strengths and weaknesses of each forum for the dissemination of scientific research? Journal articles are scholarly and academic sources that include specific information on a topic, typically from an expert or reviewed by one. They also usually have research and evidence to support their work. Strengths of journal articles is that they are credible and can be trusted, they contain accurate information and have helpful research. Weaknesses of journal articles is that they must be read through to © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 7
completely understand and often hold confusing terms and information that the average reader may not understand. Popular news media also spreads scientific information, but in a different way. This approach is geared towards the general public and motivates to inform the community, whereas journals are used for specific purposes/research. Popular news media is beneficial in that it can spread important information to the public efficiently and in simpler terms. Weaknesses of this approach is that it can potentially leave gaps in information and fail to thoroughly explain topics. Conclusion 1. What is the purpose of a scientific abstract? The purpose of a scientific abstract is to allow the reader to have a general understanding of the particular study and what it entailed before they get into all the detailed data and information. 2. Explain how information about the author, purpose, and content of a website can help you assess overall credibility. Knowing the background of the author allows you to determine if they are suitable and reliable to be speaking on certain topics. For example, if I read a study on covid safety protocols but it was written by a farmer with no experience in that area, I wouldn’t really trust what they had written. The purpose of a website allows you to know why the author created it and if the information written has a good intention. The content of a website allows you to see if the overall point of the website aligns with what you want to learn more about. 3. Describe at least two differences between the way in which scientific information is presented in journal articles and the way in which the information is presented in popular news media. What are the strengths and weaknesses of each forum for the dissemination of scientific research? Scientific information in journal articles is presented in complex and scientifically correct terms. It contains accurate information that relates to a specific topic and includes research to back up what it is saying. Journal articles are great for researching things further and understanding scientific subjects more thoroughly. Within popular news media, scientific information is typically put into simpler terms that the average person can comprehend. They may include more basic information, but still succeed in informing the general public of scientific issues/topics. Strengths of journal articles is that © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 8
they include extensive knowledge upon rather specific topics to further educate an audience. They also are composed by experts which adds a sense of credibility to the article. Weaknesses of journal articles is that they can be hard to understand and require much more thorough reading to understand. Additionally, they may not be helpful in educating the general person. Strengths of popular news media is that they spread scientific information quickly, and educate people in simple and comprehensible terms. Weaknesses of popular news media is that they may leave important details out if deemed too complicated and are not typically coming from experts. 4. John is deciding on a topic for his independent project. His dad has just been diagnosed with Parkinson’s disease. He is interested in learning more about current treatment methods for the illness, including the future of therapies such as stem cells. Provide John with at least two helpful tips on how to begin his research. To begin researching, John should aim to use more journal articles, as they will include more scientific research and vast information on the topic. They will include current treatment methods and how they work and will mention the drawbacks of said treatments. Also, he can try to use websites ending in .edu, .org, and .gov to avoid receiving any form of misinformation and to find the most credible sources. Summary outline: a. Emergency department triage: an ethical analysis i. Ethical dilemmas arise from the consequences of inadequate triage in emergency departments, such as delayed treatment, breach of privacy and confidentiality, inadequate communication between doctors and patients, failure to provide necessary care, or even the decision of whose life to save. 1. Respect for Autonomy a. Autonomy is very difficult to assess especially when urgent situations arise. b. Refusing to provide a patient who arrives at the ED with immediate medical attention goes against the idea of respecting their autonomy. 2. Nonmaleficence a. “Do no harm” b. Triage does not directly cause harm, unless patients with severe injuries are classified as dead. © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 9
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c. Long wait times for consultations can worsen outcomes, cause more agony and suffering, and consequently cause indirect harm. d. Psychosocial harm encompasses feelings of stress, fear, and neglect or lack of attention. 3. Beneficence a. Beneficence is a positive action performed for the benefit of others rather than just abstaining from harmful acts. b. Based on the moral obligation to contribute to the benefit or well-being of people. 4. Justice a. Equity, not equality b. Distributive justice indicates that decisions about resource allocation are to be made fairly in light of the limited resources available © 2011 Project Lead The Way, Inc. Biomedical Innovation A1.1.2 Research and Documentation – Page 10