Week 4 laboratory reflection - UV mutagenesis

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Indiana University, Bloomington *

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113

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Biology

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Dec 6, 2023

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Name: Laboratory Reflection: UV mutagenesis - Week 1 Instructions: Make sure to scroll through the entire document to answer all questions. It would also help with grading if you put your typed answers in a different (but readable) color font . Save and upload your completed assignment to the associated assignment page on Canvas. It is the student’s responsibility to confirm that the correct file was submitted to Canvas by the due date. 1. In this week’s laboratory, you plated trp1-289 yeast onto two different kinds of media (SD trp- plates and SC plates). a. (1pt) What is the difference between trp1-289 and wildtype yeast cells? The trp1-289 cells will mutate but end up staying relatively close to their parent cells, but wildtype yeast cells will mutate and change endlessly. b. (1pt) How can plating trp1-289 yeast onto SD media allow you to test for a phenotypic reversion? Be specific. When growing on an SD media, we can see the reversion much more clearly. 2. The original yeast culture you used to inoculate the SD-media plates should have quite a high concentration of cells/ml. The solution you used to inoculate the SC medium plates is a 10 -4 dilution of the original. a. (1pt) What do you think would happen if you used a diluted yeast solution to inoculate the SD (trp- medium) plates? There wouldn’t be enough growth to determine a reversion. b. (1pt) What would happen if you used the concentrated original yeast culture to inoculate the SC-media plates? There would be too much growth, and we wouldn’t be able to get an accurate count like we can with diluted amounts. 3. (1pt) In the following picture, each row is a serial dilution of yeast plated on SC media. One dilution was made from a culture that was mutagenized with UV light for an extended period, one was mutagenized briefly, and one was a control (not mutagenized). To the right of each Row (A, B and C) write the type of treatment (Extended UV, Brief UV, or Control) that each dilution series received. A = Control B= Extended UV C= Brief UV 4. Consider the relationship between UV exposure (e.g. UV exposure time) and cell death. 1 A B C
a. (1pt) Would you predict there to be a positive or negative relationship between UV exposure and cell death in trp1-289 yeast plated on SC medium? Why? ( Hint: a positive relationship occurs when the first variable increases, and the second variable increases as well. A negative relationship occurs when one variable increases, and the second variable decreases.) I would predict a positive relationship between UV exposure and cell death in this scenario. More UV would mean more cells are completely killed, and they wouldn’t be able to reproduce to a visible level or at all. b. (1pt) Which variable (i.e. cell death or UV exposure time) is the dependent variable and which is the independent variable? UV exposure time is the independent variable and cell death is the dependent variable. 5. Consider the relationship between UV exposure (e.g. UV exposure time) and colony formation in trp1-289 yeast plated on SD medium. a. (1pt) Would you predict there to be a positive or negative relationship between UV exposure and colony formation (i.e. number of colonies) in trp1-289 yeast plated on SD medium. Why? I would predict a negative relationship because more UV means more cell death, which would decrease colony formation. b. (1pt) If you were to graph this relationship, which variable (i.e. number of trp1-289 colonies on SD medium or UV exposure time) would go on the x-axis and which would go on the y-axis? UV exposure would be on the x axis and colony count would be on the Y axis. c. (1pt) Explain why this relationship might not be linear? ( Hint: use the information you generated in Q3&4 above ). Include a description of what this relationship might look like? It might not be a linear relationship because the differences in the levels of exposure are very different. The 20 second time may not kill very many cell colonies, while the 60 second time may be enough to kill more than 3x what was killed in the 20 second timer. 2
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