Lion populations are found all over sub- Saharan africa. How do the sequences above reinforce or contradict the idea that populations of lions who are genetically similar live in the same geographic area?
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Genetic Variation
Genetic variation refers to the variation in the genome sequences between individual organisms of a species. Individual differences or population differences can both be referred to as genetic variations. It is primarily caused by mutation, but other factors such as genetic drift and sexual reproduction also play a major role.
Quantitative Genetics
Quantitative genetics is the part of genetics that deals with the continuous trait, where the expression of various genes influences the phenotypes. Thus genes are expressed together to produce a trait with continuous variability. This is unlike the classical traits or qualitative traits, where each trait is controlled by the expression of a single or very few genes to produce a discontinuous variation.
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- The tiny frog Paedophryne amauensis was discovered by researchers purposefully searching for the source of an unusual sound, but sometimes similarity between two species can lead scientists to accidental discoveries. A previously unknown species of wild cat was inadvertently discovered by researchers who were sequencing the DNA of a house cat–sized South American wild cat called the tigrina. The DNA analysis revealed that many alleles found in the supposed tigrinas living in northeastern Brazil are not shared with other tigrinas. This finding suggested that the northeastern cats do not interbreed with other tigrinas and are therefore a different species. What prevents the two species from interbreeding?Steven Frank and Laurence Hurst argued that a cytoplasmically inherited mutation in humans that has severe effects in males but no effect in females will not be eliminated from a population by natural selection because only females pass on mtDNA. Using this argument, explain why males with Leber hereditary optic neuropathy are more severely affected than females.Native American populations in North and South America have mitochondrial DNA haplotypes that can be traced to populations in northeast Asia. The Aleut and Eskimo populations in the far northern parts of North America possess a subset of the same haplotypes that link other Native Americans to Asia, and also have several additional haplotypes that can be traced to Asian origins but are not found in native populations in other parts of the Americas. Which statement offers a possible explanation for this observation? The pattern of haplotypes in the Aleut and Eskimo populations suggests that their ancestors' migration into the American Arctic regions was separate from the migrations that eventually populated the rest of North and South America. The subset of similar haplotypes between the two populations suggests that the Native American populations with a link to Asia descended from the Aleut and Eskimo populations residing in the far northern parts of North America. Sharing a subset of…
- (a) Assuming that Migaloo’s albinism is caused by a rare recessive gene, what would be the likelihood of the establishment of a natural robust subpopulation of albino white humpback whales in this population? (b) Assuming that Migaloo’s albinism is caused by a rare dominant gene, what would be the likelihood of the establishment of a natural robust subpopulation of albino white humpback whales in this population?1). Penguins in Stewart Island have a recessive mutation "twist-tail" that causes problems in the control of direction when swimming. In 2008 a survey of a large, freely interbreeding, population of 2,732 penguins revealed 316 with twist-tail phenotype. a) What percentage of the penguin population would you expect to be heterozygous at the twist-tail locus ? b) Where there is no mutation, migration or selection what percentage of the next generation would be homozygous dominants, heterozygotes and homozygous recessives?The Scarborough shoal in the South China sea is home to the Peliotsky turtle. A recessive mutation "floppy" is known in the turtle which interferes with normal flipper growth and makes the turtle less mobile and unable to survive severe storms. In 2008 a sample survey of a large, freely interbreeding, population of turtles found 47 individuals with the mutant phenotype out of a population of 341 individuals. a) Calculate the frequencies of the recessive and dominant alleles in the turtle population.
- 1). Penguins in Stewart Island have a recessive mutation "twist-tail" that causes problems in the control of direction when swimming. In 2008 a survey of a large, freely interbreeding, population of 2,732 penguins revealed 316 with twist-tail phenotype. a) What percentage of the penguin population would you expect to be heterozygous at the twist-tail locus ? b) Where there is no mutation, migration or selection what percentage of the next generation would be homozygous dominants, heterozygotes and homozygous recessives? c) In 2010 the population had risen to 3,800 individuals when the surrounding sea became home to a large pod of killer whales which eliminated all the penguins with twist-tail phenotype which were easy to catch. What would be the dominant and recessive allele frequencies in the next generation?2) The year is 2050. The climate has continued to warm. Areas in northern Canada and Alaska are without snow or ice; the average annual temperature has risen and previously snow-covered areas are now shrub land and some temperate forests. What effect would such a climatic change have on the gene pool of the rabbits? All BUT ONE could apply. A) The allelic frequency has most likely shifted to 85% GG and 15% gg. B) The dominant allele in the gene pool would become G, the previously rare allele. C) The allele for white, g, would be scarce and perhaps nonexistent in the population. D) White rabbits would be at a disadvantage in terms of camouflage and would likely fall prey to predators.What is inbreeding depression and why is it particularly a concern for conservation biology? A) It is a chemical imbalance in the brain of animals forced into close quarters, such as those rescued from the wild and placed in zoos. B) It is a situation where the frequency of an allele over time depends greatly upon its initial frequency, as such if populations are too small, the present alleles are at risk of being lost. C) It is a situation where offspring of genetic relatives have increased fitness, this occurs when populations of animals are large and they mate freely. D) It is a situation where offspring of genetic relatives have reduced fitness, this occurs when populations of animals become too small and they are thus likely to mate with closely related individuals.
- Steven Frank and Laurence Hurst argued that a cytoplasmically inherited mutation in humans that has severe effects in males but no effect in females will not be eliminated from a population by natural selection because only females pass on mtDNA (S. A. Frank and L. D. Hurst. 1996. Nature 383:224). Using this argument, explain why males with Leber hereditary optic neuropathy are more severely affected than females.The MC1R gene affects skin and hair color in humans.There are at least 13 polymorphisms of the gene inEuropean and Asian populations, 10 of which are nonsynonymous. In Africans, there are at least 5 polymorphisms of the gene, none of which are nonsynonymous.What might be one explanation for the differences inMC1R variation between Africans and non-Africans?Since nucleotide sequences are more variable than amino acid sequences, you’ll use GAPDH nucleotide sequences to compare across the six taxa you’re analyzing. Suppose that you used BLAST to align all possible pairs of GAPDH sequences among lancelet, lamprey, bass, frog, turtle, and leopard. You would be able to construct the following table showing the percent similarity values across all six taxa. Leopard Turtle Frog Bass Lamprey Lancelet Leopard 100% 83% 80% 81% 76% 74% Turtle – 100% 79% 79% 74% 72% Frog – – 100% 79% 74% 71% Bass – – – 100% 77% 74% Lamprey – – – – 100% 73% Lancelet – – – – – 100% Now you can use this data (similarly to how you used the data in the character table) to build a phylogenetic tree. The distance between species in a tree is directly related to the amount of similarity between their gene sequences. For instance, two species will be closer together if the amount of similarity is high, or far apart if the amount of similarity is low. Which…