In the presence of potassium cation, O, and CO, the enzyme microsomal carboxylase will convert glufamate side chains of prothrombin (an essential protein for blood clotting) to y-carboxyglutamate groups. This is formally the addition of a CO, group, which is the reverse of a decarboxylation as is common for B-dicarboxylic acids such as malonic acid. The resulting two carboxylates of the chemically modified glutamate now form a tight bidentate ("two teeth") complex with Ca+ during the blood- clotting process. If prothrombin is not carboxylated, it does not bind calcium, and blood does not clot. For decades the role of vitamin K, and 0,in this process Vitamin K deficiency results in slowed blood clotting, which can be a serious threat to a wounded animal or human. In the process of blood clotting, the natural vitamin, which is a quinone, is converted to its active hydroquinone form by reduction. OH .R R tworclectron reduction Vitamin K, quinone Vitamin K, hydroquinone was unknown. pK CH,-CH -CH,-CH vit. K COO COO Glutamate side chain of prothrombin COO Ca+ CH -CH-CH Ca2+ COO Carboxylated glutamate side chain Carboxylated glutamate side chain binding calcium ion Paul Dowd, from the University of Pittsburgh, discovered that the vitamin K, hydroquinone anion reacts with oxygen (0,) to give the peroxide anion intermediate 1, which is converted to compound 2, and then to what is referred to as "vitamin K, base." This species deprotonates a glutamate side chain leading to carboxylation via reaction with CO,. .R HO HO HO 0: :0-0: Vitamin K, hydroquinone anion (a weak base) Vitamin K, base (a very strong base) 1
Neutral Amino Acids
Amino acids which do not have any charge on them are neutral amino acids.
Globular Protein
The globular proteins refer to the shape of protein specifically spherical in nature apart from spherical form fibrous, disordered and membrane-bound proteins exist. These globular proteins are miscible in water and form a colloidal solution rather than other types which might not exhibit solubility. Many classes of the fold are found in globular proteins, which render them a sphere shape. Globular fold containing proteins usually are referred to by the term globin.
Dimer
Dimers are basic organic compounds, which are derivates of oligomers. It is formed by the combination of two monomers which could potentially be strong or weak and in most cases covalent or intermolecular in nature. Identical monomers are called homodimer, the non-identical dimers are called heterodimer. The method by which dimers are formed is known as “dimerization”.
Dipeptide
A dipeptide is considered a mixture of two distinct amino acids. Since the amino acids are distinct, based on their composition, two dipeptide's isomers can be produced. Various dipeptides are biologically essential and are therefore crucial to industry.
Which of the following is a challenge to understanding how the carboxylation of glutamate side chains is feasible in a biological setting?
1. Because the pKa of the a-hydrogen of glutamate is 27, it is too high to be effectively deprotonated at physiological pH.
2. The C-C bond formed in a 1,3-dicarboxylate is too weak to exist in a biological setting.
3. b-Dicarboxylic acids spontaneously decarboxylate at neutral pH.
4. Both 1 and 3.
Step by step
Solved in 2 steps with 1 images