Fill out the dynamic programming table for the local alignment between v and w
Fill out the dynamic programming table for the local alignment between v and w
Database System Concepts
7th Edition
ISBN:9780078022159
Author:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan
Publisher:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan
Chapter1: Introduction
Section: Chapter Questions
Problem 1PE
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Question
Fill out the dynamic

Transcribed Image Text:2. Assume the scoring matrix and sequences v and w from Question 1.
a. Fill out the dynamic programming table for the local alignment between v and w. Use the following re-
cursive scoring formula.
|Si-1.j-1+ 8(v;, W;)
= max
+ 8 (Vi, –)
Sij
Si-1,j
Sij-1+ 8(-,w;)
G C А Т С
с А
1 2 3 4 5 6 7
v=
1
А
G
C
4
T
5
C
6.
C
7
G
8
b. What is the score and local alignment between v and w?
2.
3.
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