At what pH does peptide the His-Arg have a net charge of +1.7?
Biochemistry
9th Edition
ISBN:9781319114671
Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Chapter1: Biochemistry: An Evolving Science
Section: Chapter Questions
Problem 1P
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Step 1: Ionization of a peptide
Recall that:
- Amino acid sequences are written with N-terminal amino acid on the left and C-terminal amino acid on the right.
- The peptide bond is formed between the carboxyl group of N-terminal amino acids and the amino group of C-terminal amino acids.
- The charge on the amino acid residue will depend on the charge of the ionisable group because charges on alpha-amino/carboxyl groups are neutralised due to the formation of a peptide bond.
- Terminal amino/carboxyl groups are ionisable.
pKa is the pH at which the weak acid is 50% dissociated.
When the pH < pKa of the ionising group, the group remains protonated.
- If it is an acidic amino acid then 0 charge.
- if it is a basic amino acid then +1 charge.
When pH > pKa of an ionising group, the group is deprotonated.
- If it is an acidic amino acid then, deprotonation causes the development of a -1 charge.
- if it is a basic amino acid then deprotonation causes 0 charges.
If pH = pKa of the ionising group, 50% of the ionising group is protonated.
- If it is an acidic amino acid then -0.5 charge.
- if it is a basic amino acid then +0.5 charge.
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