A lysine is burined inside a protein surrounded by hydrophobic resiudes, how does this affect the pKa of lysine?
A lysine is burined inside a protein surrounded by hydrophobic resiudes, how does this affect the pKa of lysine?
Biochemistry
9th Edition
ISBN:9781319114671
Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Chapter1: Biochemistry: An Evolving Science
Section: Chapter Questions
Problem 1P
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A lysine is burined inside a protein surrounded by hydrophobic resiudes, how does this affect the pKa of lysine?
Expert Solution
Step 1: Introduction.
Answer :- The behavior of amino acid residues within a protein is profoundly influenced by their microenvironment. Lysine, an amino acid with a basic side chain, is no exception. When a lysine residue is buried inside a protein and surrounded by hydrophobic residues, its pKa, which represents the pH at which it becomes ionized, can be significantly affected.
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