A biochemist makes up 95 mL of a 0.12 M solution of histidine at a pH of 5.6. She then adds 60 mL of 0.10 M HCI. What is the pH of the resulting solution?
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- The amino acid arginine ionizes according to the following scheme: NH₂ I C=N I ΝΗ Part A pl = Submit H (CH₂)3 H-N-C-COOH II HH 1 [ΠΙ ΑΣΦ H H Calculate the isoelectric point of arginine. Express your answer using three significant figures. Request Answer pk-2.17 -H* +H* wwwww NH₂ C=N ΝΗ H (CH₂)3 1 ? H H-N-C-COO- | | H H 11 H pk-8.99 -H* +H* NH₂ I C=N I ΝΗ T (CH₂)3 H H H₂N-C-COO- I H pk - 12.5 -H* +H* NH₂ C=N=H NH I (CH₂)3 H₂N-C-COO- I H IVPlace each charge form of alanine under the pH condition where it would be the predominant form. The pK₁ values for the carboxyl group and amino group of alanine are approximately 2.3 and 9.7, respectively. pH 11 H | H₂C-C-COO NH₂ Does not occur in significant amounts at any pHIdentify the following non-chiral molecule: NH2-CH2-COOH (dry form) aspartic acid arginine glycine tyrosine asparagine
- Based on the following titration table of Glycine, would you be able to recreate the same for Histidine? Increasing pH – Glicina H H-N-CH,-COOH = H-N-CH,-CO0- = H-N-CH,-coo- H H Net charge: +1 -1 pH COOH-pKa = 2.3 NH3-pKa = 9.6 CN ΔΕ +1 +1 2.3 (0.5*-1)+(0.5*0)=-0.5 +1 +0.5 0.5 9.6 -1 (0.5*+1)+(0.5*0)=+0.5 -0.5 1.5 14 -1 -1 2 Given that the pKas for Histidine are the following: pka1 = 1.82 pKa2 = 9.17 pКа3 %3D 6.00 pl = 7.59An oligopeptide has the following amino acid sequence: NH2-Ala-Glu–Leu–Trp–Tyr-Ser–Gly–Lys–Leu-Ala–Arg-Ala-Phe-Ile-Pro–Gly-COOH a) Estimate the net electric charge of the molecule at pH 8.0 and pH 11.0. b) If the above peptide is passed through a cation exchange chromatographic column (that is, the matrix of the column has negative charges) stabilized at pH 8.0, would you expect it to be retained on the column? c) Indicates the number of fragments, and the sequence of each of them, that would be obtained when treating the peptide in question with: i) trypsin, ii) chymotrypsin.Write the one letter code for the oligopeptide Ser-Cys-Ile-Glu-Asn-Cys-Glu and calculate the total charge on it at pH 4.5.
- Stereochemistry in biological molecules is often denoted by the D- and L- convention, instead of the R- and S- configurations determined by the Cahn-Ingold-Prelog methodology. Naturally occurring a-amino acids are typically in the L-configuration. The Fischer projection of L-alanine is shown. L-alanine H₂N- COOH H- CH3 Identify which structures are equivalent to the L-configuration. CH3 H -NH₂ COOH H COOH NH₂ -CH3A sample (660 mg) of a (homo)oligomeric protein of molecular weight of 132,000 Da was treated with an excess of 2,4-dinitro-fluorobenzene until the reaction was complete. The peptide bonds were then completely hydrolyzed by heating with 6 M hydrochloric acid. The hydrolysate was found to contain 5.5 mg of the following compound. NO2 O2N- NH НООС 2,4-Dinitrophenyl derivatives of the amino groups of other amino acids were not found. a). How many polypeptide chains are there in this protein? Show your work. b). Assuming that each of the subunit contains entirely a-helices, how many a-helical turns would there be, approximately, in each of the subunit? "For a protein of typical composition, average amino acid residue mass is ca. 110 Da."Stereochemistry in biological molecules is often denoted by the D- and L- convention, instead of the R- and S- configurations determined by the Cahn-Ingold-Prelog methodology. Naturally occurring α-amino acids are typically in the L-configuration. The Fischer projection of L-alanine is shown. L-alanine H₂N- H3C- HOOC Identify which structures are equivalent to the L-configuration. H COOH H CH3 NH₂ -COOH NH₂ CH3 -H CH3 COOH H -NH₂ H₂N- H CH3 COOH NH₂ H CH3 -COOH
- Provide the correct three-letter abbreviation for the following amino acid: O || H₂N-CH-C-OH I CH₂ CH₂ C=O I NH₂Given the following Peptide: Q6 *H;N-Phe-Asp-Ala-Arg-Gy-His-Arg-Asp-Glu-His-Tyr-CO 6a. What is the peptide's net charge at pH 2.0, pH 6.0, pH 7.4, and pH 10.2? (show work) 6b. What is the approximate isoelectric point of this peptide?T/F: The titration curve for serine will have 2 inflection points. T/F: The Amino Acid D-selenocysteine has an R-Configuration T/F: Each water molecule can form H bonds with 4 other water molecules T/F: In a buffer system, decreasing the concentration of the conjugate base relative to acid makes the buffer more acidic T/F: Glycine forms good interactions in a protein structure True or false?