Write a C++ code that: 1. Read the sequences in the provided fasta file (unzip the attached file) 2. Build a Kmer count table (use array) where k 10;

Database System Concepts
7th Edition
ISBN:9780078022159
Author:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan
Publisher:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan
Chapter1: Introduction
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4.
Write a C++ code that:
1. Read the sequences in the provided fasta file (unzip the attached file)
2. Build a Kmer count table (use array) where k = 10%;
3. Build a histogram table of size 200 in which we store the frequency of counts collected in step 2. if
frequency is 200 or more, increment the last element in the histogram array.
4. Report the results of histogram table to screen as the following:
Kmer-Count Frequency
1
100
80
3
40
20
....
200
300
Transcribed Image Text:4. Write a C++ code that: 1. Read the sequences in the provided fasta file (unzip the attached file) 2. Build a Kmer count table (use array) where k = 10%; 3. Build a histogram table of size 200 in which we store the frequency of counts collected in step 2. if frequency is 200 or more, increment the last element in the histogram array. 4. Report the results of histogram table to screen as the following: Kmer-Count Frequency 1 100 80 3 40 20 .... 200 300
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