Task 2: Find where the primers bind to in the gene sequences on Moodle (kan has been provided for you as a reference) Gene Forward Primer 5' to 3' lacz fliE Size of gene (bp) 3075 315 rpoA 990 nagC 1221 GCTCAGAACGTACCACCG ompA 1041 GCCGGGATACCTTTGG lexA 609 GTTCGACTTTATTGCCCTG kan cassette 816 CCTGGTATCGGTCTGC GGAAGCCCGATGCGCCAGAG 549 tet casette 1148 CTATAAACCGCACTGTGA GTCCTGGATTCCTCAGGT The reverse primer is the reverse compliment - remember to reverse compliment when looking for it in the sequences. Kan has been completed for you GTTAACCGTCACGAGCATC ACAGGGGATTGAAGGGGTTA Reverse primer 5' to 3' CGTTCAGGAAGATATCC CGCTGCCAACGCTGC GGCCCGACCCATGAAAAC GGCACGCAAAGGCGTTATTGA Expected size of PCR product (bp) TGATCACACTCGGGTGATTAC CGCACCTGAATCCCCATTTGC GGATCGATTGTGCCGTTGGTTT
Task 2: Find where the primers bind to in the gene sequences on Moodle (kan has been provided for you as a reference) Gene Forward Primer 5' to 3' lacz fliE Size of gene (bp) 3075 315 rpoA 990 nagC 1221 GCTCAGAACGTACCACCG ompA 1041 GCCGGGATACCTTTGG lexA 609 GTTCGACTTTATTGCCCTG kan cassette 816 CCTGGTATCGGTCTGC GGAAGCCCGATGCGCCAGAG 549 tet casette 1148 CTATAAACCGCACTGTGA GTCCTGGATTCCTCAGGT The reverse primer is the reverse compliment - remember to reverse compliment when looking for it in the sequences. Kan has been completed for you GTTAACCGTCACGAGCATC ACAGGGGATTGAAGGGGTTA Reverse primer 5' to 3' CGTTCAGGAAGATATCC CGCTGCCAACGCTGC GGCCCGACCCATGAAAAC GGCACGCAAAGGCGTTATTGA Expected size of PCR product (bp) TGATCACACTCGGGTGATTAC CGCACCTGAATCCCCATTTGC GGATCGATTGTGCCGTTGGTTT
Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
Publisher:Elaine N. Marieb, Katja N. Hoehn
Chapter1: The Human Body: An Orientation
Section: Chapter Questions
Problem 1RQ: The correct sequence of levels forming the structural hierarchy is A. (a) organ, organ system,...
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Transcribed Image Text:Task 2: Find where the primers bind to in the gene sequences on Moodle (kan has been
provided for you as a reference)
Gene
Size of
gene (bp)
3075
315
Грод
990
nagC
1221
ompA
1041
lexA
609
kan cassette 816
tet casette 1148
lacz
fliE
Forward Primer
5' to 3'
GTTAACCGTCACGAGCATC
ACAGGGGATTGAAGGGGTTA
CGTTCAGGAAGATATCC
CGCTGCCAACGCTGC
GGCCCGACCCATGAAAAC
GGCACGCAAAGGCGTTATTGA
Reverse primer
5' to 3'
TGATCACACTCGGGTGATTAC
CGCACCTGAATCCCCATTTGC
GGATCGATTGTGCCGTTGGTTT
Expected size of
PCR product (bp)
GCTCAGAACGTACCACCG
GCCGGGATACCTTTGG
GTTCGACTTTATTGCCCTG
CCTGGTATCGGTCTGC
GGAAGCCCGATGCGCCAGAG 549
CTATAAACCGCACTGTGA
GTCCTGGATTCCTCAGGT
The reverse primer is the reverse compliment - remember to reverse compliment when looking for it in the sequences. Kan has been
completed for you

Transcribed Image Text:nagC primers
M L1 L2 L3 L4
|||||||||||||
lacZ primers
M L1 L2 L3 L4
fliE primers
M L1 L2 L3 L4
I
ompA primers
M L1 L2 L3 L4
|||||||||||||
tet primers
M L1 L2 L3 L4
kan primers
M L1 L2 L3 L4
kan primers
M L1 L2 L3 L4
kan primers
M L1 L2 L3 L4
bp
-10,000
-8,000
-6,000
-5,000
-4,000
-3,000
-2,500
-2,000
-1,500
-1,000
-750
-500
-250, 253
1.2% agarose
k
I=
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