Sequence length: 1000 The following sites are segregating: 12 A C G C T C G C C C G C C G G TTT G A T T GA GA C G C CTC CTC A ATGT CTT GT CTT GG CTG G G CT GT G The data file consists of all the polymorphic positions in 1000bp of many different genes from 5 haploid individuals (the location of the polymorphic sites does not matter here). You will analyze the gene dataset assigned to you (in data_assignment.xlsx). Analyze the data to estimate the parameters below: 1. Proportion of Segregating Sites, S (3 decimal places) 2. Number of mismatches at each segregating site, presented in the same order as in the dataset and separated by commas (e.g.: 3,4,4,3...) 3. Nucleotide diversity, π (4 decimal places)

Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
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Chapter1: The Human Body: An Orientation
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Sequence length: 1000
The following sites are segregating:
A C G
C
A
C
GCC
TC
TCG
G C C
G C
TTT
12
T G A A
G A
G
C
T C
GCT C
A T
стт
G T
G
T
TG
G
CT
CT
CT
G G
G
GT G
The data file consists of all the polymorphic positions in 1000bp of many different
genes from 5 haploid individuals (the location of the polymorphic sites does not
matter here). You will analyze the gene dataset assigned to you (in
data_assignment.xlsx).
Analyze the data to estimate the parameters below:
1. Proportion of Segregating Sites, S (3 decimal places)
2. Number of mismatches at each segregating site, presented in the same order
as in the dataset and separated by commas (e.g.: 3,4,4,3...)
3. Nucleotide diversity, π (4 decimal places)
Transcribed Image Text:Sequence length: 1000 The following sites are segregating: A C G C A C GCC TC TCG G C C G C TTT 12 T G A A G A G C T C GCT C A T стт G T G T TG G CT CT CT G G G GT G The data file consists of all the polymorphic positions in 1000bp of many different genes from 5 haploid individuals (the location of the polymorphic sites does not matter here). You will analyze the gene dataset assigned to you (in data_assignment.xlsx). Analyze the data to estimate the parameters below: 1. Proportion of Segregating Sites, S (3 decimal places) 2. Number of mismatches at each segregating site, presented in the same order as in the dataset and separated by commas (e.g.: 3,4,4,3...) 3. Nucleotide diversity, π (4 decimal places)
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