One approach to find approximate matches is to use a strategy known as filtration. What is the basic logic of filtration? Filtration removes all of the areas of the sequences that do not overlap to reduce computational time. Filtration refers to the practice of drinking a cup of filtered coffee before trying to find approximate matches. The caffeine from the filtered coffee helps us remember the correct answer. A pair of sequences will share multiple k-mers that can be used to seed the alignment.
One approach to find approximate matches is to use a strategy known as filtration. What is the basic logic of filtration? Filtration removes all of the areas of the sequences that do not overlap to reduce computational time. Filtration refers to the practice of drinking a cup of filtered coffee before trying to find approximate matches. The caffeine from the filtered coffee helps us remember the correct answer. A pair of sequences will share multiple k-mers that can be used to seed the alignment.
Computer Networking: A Top-Down Approach (7th Edition)
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ISBN:9780133594140
Author:James Kurose, Keith Ross
Publisher:James Kurose, Keith Ross
Chapter1: Computer Networks And The Internet
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![One approach to find approximate matches is to use a strategy known as filtration.
What is the basic logic of filtration?
Filtration removes all of the areas of the sequences that do not overlap to
reduce computational time.
Filtration refers to the practice of drinking a cup of filtered coffee before trying
to find approximate matches. The caffeine from the filtered coffee helps us
remember the correct answer.
A pair of sequences will share multiple k-mers that can be used to seed the
alignment.
Any pair of sequences withk mismatches will also have multiple exact matches
that can be found with existing exact matching approaches (e.g., suffix trees). If
you keep k small, this can generally be an efficient way to find approximate
matches.
Question 9
We often discuss the efficiency of algorithms using "Big O Notation" to express how
computational time changes with increasing amount of data N. Please order the
following notations from most efficient (1) to least efficient (3).
O(n")
O(n)
O(n²)](/v2/_next/image?url=https%3A%2F%2Fcontent.bartleby.com%2Fqna-images%2Fquestion%2Fbaf10437-7338-4a0e-a177-54dd4b40ee8e%2F36a8c28e-6fb1-4b45-a37c-9271e97afe72%2Flkne9xc_processed.jpeg&w=3840&q=75)
Transcribed Image Text:One approach to find approximate matches is to use a strategy known as filtration.
What is the basic logic of filtration?
Filtration removes all of the areas of the sequences that do not overlap to
reduce computational time.
Filtration refers to the practice of drinking a cup of filtered coffee before trying
to find approximate matches. The caffeine from the filtered coffee helps us
remember the correct answer.
A pair of sequences will share multiple k-mers that can be used to seed the
alignment.
Any pair of sequences withk mismatches will also have multiple exact matches
that can be found with existing exact matching approaches (e.g., suffix trees). If
you keep k small, this can generally be an efficient way to find approximate
matches.
Question 9
We often discuss the efficiency of algorithms using "Big O Notation" to express how
computational time changes with increasing amount of data N. Please order the
following notations from most efficient (1) to least efficient (3).
O(n")
O(n)
O(n²)
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