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Consider the problem of searching for genes in DNA sequences using Horspool's algorithm. A DNA sequence is represented by a text on the alphabet {A, C, G, T}, and the gene segment is the pattern. Let the pattern be TAACTCCT 1.1) Construct the shift table t for the gene segment of chromosome length 8 (pattern) is given above. Character e A C G T Shift t(c)

Consider the problem of searching for genes in DNA sequences using Horspool's algorithm. A DNA sequence is represented by a text on the alphabet {A, C, G, T}, and the gene segment is the pattern. Let the pattern be TAACTCCT 1.1) Construct the shift table t for the gene segment of chromosome length 8 (pattern) is given above. Character e A C G T Shift t(c)

Computer Networking: A Top-Down Approach (7th Edition)
Computer Networking: A Top-Down Approach (7th Edition)
7th Edition
ISBN:9780133594140
Author:James Kurose, Keith Ross
Publisher:James Kurose, Keith Ross
Chapter1: Computer Networks And The Internet
Section: Chapter Questions
Problem R1RQ: What is the difference between a host and an end system? List several different types of end...
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Consider the problem of searching for genes in DNA sequences using Horspool's algorithm. A DNA sequence is represented by a text on the alphabet {A, C, G, T}, and the gene segment is the pattern. Let the pattern be TAACTC C T 1.1) Construct the shift table t for the gene segment of chromosome length 8 (pattern) is given above. Character c A C T Shift t(c) Apply Horspool's algorithm to locate the pattern given above in the following DNA sequence 1.2) (text): TTATAGCTTCTTATA GGCTCGCTAACTCCT |Number of comparisons |(Karşılaştırma sayısı) TTATA GCTTCTTATA GGCTC GCTAA CTC CT Total number of comparisons:
Transcribed Image Text:Consider the problem of searching for genes in DNA sequences using Horspool's algorithm. A DNA sequence is represented by a text on the alphabet {A, C, G, T}, and the gene segment is the pattern. Let the pattern be TAACTC C T 1.1) Construct the shift table t for the gene segment of chromosome length 8 (pattern) is given above. Character c A C T Shift t(c) Apply Horspool's algorithm to locate the pattern given above in the following DNA sequence 1.2) (text): TTATAGCTTCTTATA GGCTCGCTAACTCCT |Number of comparisons |(Karşılaştırma sayısı) TTATA GCTTCTTATA GGCTC GCTAA CTC CT Total number of comparisons:
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